- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.69 Å
- Oligo State
- homo-dimer
- Ligands
- 9 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 2 x PLP: PYRIDOXAL-5'-PHOSPHATE(Non-covalent)
PLP.2: 15 residues within 4Å:- Chain A: S.164, G.165, T.166, N.169, Y.192, H.193, G.194, E.240, D.273, V.275, M.276, K.300
- Chain B: G.333, T.334
- Ligands: SFE.3
12 PLIP interactions:2 interactions with chain B, 10 interactions with chain A- Hydrogen bonds: B:T.334, A:G.165, A:T.166, A:T.166, A:N.169
- Water bridges: B:F.335, A:S.164, A:T.166, A:F.308
- Hydrophobic interactions: A:Y.192, A:E.240, A:V.275
PLP.8: 15 residues within 4Å:- Chain A: G.333, T.334
- Chain B: S.164, G.165, T.166, N.169, Y.192, H.193, G.194, E.240, D.273, V.275, M.276, K.300
- Ligands: SFE.9
12 PLIP interactions:10 interactions with chain B, 2 interactions with chain A- Hydrophobic interactions: B:Y.192, B:E.240, B:V.275
- Hydrogen bonds: B:G.165, B:T.166, B:T.166, B:N.169, A:T.334
- Water bridges: B:S.164, B:T.166, B:G.195, A:F.335
- 3 x SFE: (3S)-3-AMINO-3-PHENYLPROPANOIC ACID(Non-covalent)
SFE.3: 11 residues within 4Å:- Chain A: R.74, I.76, Y.109, Y.192, A.245, K.300, R.432
- Chain B: A.332, G.333, T.334
- Ligands: PLP.2
8 PLIP interactions:7 interactions with chain A, 1 interactions with chain B- Hydrophobic interactions: A:I.76, A:A.245
- Hydrogen bonds: A:K.300, B:G.333
- Salt bridges: A:R.74, A:K.300
- pi-Stacking: A:Y.109, A:Y.192
SFE.4: 6 residues within 4Å:- Chain A: P.241, A.251, R.253, A.285, L.289, L.388
6 PLIP interactions:6 interactions with chain A- Hydrophobic interactions: A:A.285, A:L.289, A:L.289, A:L.388
- Water bridges: A:A.251
- Salt bridges: A:R.253
SFE.9: 11 residues within 4Å:- Chain A: A.332, G.333, T.334
- Chain B: R.74, I.76, Y.109, Y.192, A.245, K.300, R.432
- Ligands: PLP.8
9 PLIP interactions:7 interactions with chain B, 2 interactions with chain A- Hydrophobic interactions: B:I.76, B:Y.192, B:A.245, A:A.332
- Hydrogen bonds: B:K.300, A:G.333
- Salt bridges: B:R.74, B:K.300
- pi-Stacking: B:Y.109
- 1 x BNZ: BENZENE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Wybenga, G.G. et al., Structural Determinants of the Beta-Selectivity of a Bacterial Aminotransferase. J.Biol.Chem. (2012)
- Release Date
- 2012-05-30
- Peptides
- BETA-TRANSAMINASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.69 Å
- Oligo State
- homo-dimer
- Ligands
- 9 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 2 x PLP: PYRIDOXAL-5'-PHOSPHATE(Non-covalent)
- 3 x SFE: (3S)-3-AMINO-3-PHENYLPROPANOIC ACID(Non-covalent)
- 1 x BNZ: BENZENE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Wybenga, G.G. et al., Structural Determinants of the Beta-Selectivity of a Bacterial Aminotransferase. J.Biol.Chem. (2012)
- Release Date
- 2012-05-30
- Peptides
- BETA-TRANSAMINASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B