SMTL ID : 2ylz.1

SNAPSHOTS OF ENZYMATIC BAEYER-VILLIGER CATALYSIS: OXYGEN ACTIVATION AND INTERMEDIATE STABILIZATION: Met446Gly MUTANT

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 33 residues within 4Å: Chain A: V.22, G.23, G.25, F.26, S.27, I.45, E.46, T.47, G.53, V.54, W.55, N.58, Y.60, R.64, C.65, D.66, I.67, Y.72, T.117, T.118, V.119, A.149, S.150, G.151, Q.152, L.153, Q.200, R.337, I.399, S.444, N.445, G.446, I.450 33 PLIP interactions: 33 interactions with chain A Hydrophobic interactions: A:W.55, A:W.55, A:L.153 Hydrogen bonds: A:G.25, A:S.27, A:S.27, A:S.27, A:T.47, A:V.54, A:D.66, A:D.66, A:Y.72, A:Y.72, A:V.119, A:V.119, A:Q.152, A:R.337, A:R.337, A:G.446 Water bridges: A:A.24, A:F.26, A:F.26, A:G.28, A:E.46, A:T.47, A:T.47, A:G.53, A:G.53, A:W.57, A:G.151, A:Q.152, A:Q.152 pi-Cation interactions: A:R.337 FAD.4: 33 residues within 4Å: Chain B: V.22, G.23, G.25, F.26, S.27, I.45, E.46, T.47, G.53, V.54, W.55, N.58, Y.60, R.64, C.65, D.66, I.67, Y.72, T.117, T.118, V.119, A.149, S.150, G.151, Q.152, L.153, Q.200, R.337, I.399, S.444, N.445, G.446, I.450 33 PLIP interactions: 33 interactions with chain B Hydrophobic interactions: B:W.55, B:W.55, B:L.153 Hydrogen bonds: B:G.25, B:S.27, B:S.27, B:S.27, B:T.47, B:V.54, B:D.66, B:D.66, B:Y.72, B:Y.72, B:V.119, B:V.119, B:Q.152, B:R.337, B:R.337, B:G.446 Water bridges: B:A.24, B:F.26, B:F.26, B:G.28, B:E.46, B:T.47, B:T.47, B:G.53, B:G.53, B:W.57, B:G.151, B:Q.152, B:Q.152 pi-Cation interactions: B:R.337

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 6 residues within 4Å: Chain A: G.195, S.196, H.220, G.388, F.389 Chain B: P.508 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.196 Water bridges: A:S.197, A:H.220, A:F.389, A:F.389 SO4.3: 6 residues within 4Å: Chain A: R.217, T.218, H.220 Chain B: N.506, V.507, P.508 6 PLIP interactions: 5 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:T.218, A:T.218, B:N.506 Water bridges: A:R.217 Salt bridges: A:R.217, A:H.220 SO4.5: 6 residues within 4Å: Chain A: P.508 Chain B: G.195, S.196, H.220, G.388, F.389 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:S.196 Water bridges: B:S.197, B:H.220, B:F.389, B:F.389 SO4.6: 6 residues within 4Å: Chain A: N.506, V.507, P.508 Chain B: R.217, T.218, H.220 6 PLIP interactions: 5 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:T.218, B:T.218, A:N.506 Water bridges: B:R.217 Salt bridges: B:R.217, B:H.220

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Orru, R. et al., Snapshots of Enzymatic Baeyer-Villiger Catalysis: Oxygen Activation and Intermediate Stabilization. J.Biol.Chem. (2011)

Release Date

2011-06-22

Peptides

PHENYLACETONE MONOOXYGENASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

PHENYLACETONE MONOOXYGENASE