- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.29 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x ZN: ZINC ION(Non-covalent)
- 2 x DOR: (4S)-2,6-DIOXOHEXAHYDROPYRIMIDINE-4-CARBOXYLIC ACID(Non-covalent)
DOR.3: 12 residues within 4Å:- Chain A: H.18, R.20, N.44, H.139, C.221, L.222, D.250, A.252, H.254, A.266, G.267
- Ligands: ZN.1
10 PLIP interactions:10 interactions with chain A- Hydrogen bonds: A:N.44, A:L.222, A:L.222, A:A.266
- Water bridges: A:R.20, A:R.20, A:A.266
- Salt bridges: A:H.18, A:R.20, A:H.254
DOR.8: 13 residues within 4Å:- Chain B: H.18, R.20, N.44, H.139, C.221, L.222, D.250, A.252, H.254, A.266, G.267
- Ligands: ZN.5, NCD.7
6 PLIP interactions:6 interactions with chain B- Hydrogen bonds: B:N.44, B:L.222
- Water bridges: B:C.268
- Salt bridges: B:H.18, B:R.20, B:H.254
- 1 x MLI: MALONATE ION(Non-functional Binders)
- 1 x NCD: N-CARBAMOYL-L-ASPARTATE(Non-covalent)
NCD.7: 18 residues within 4Å:- Chain B: H.16, H.18, R.20, N.44, K.102, Y.104, H.139, H.177, C.221, L.222, D.250, A.252, H.254, A.266, G.267
- Ligands: ZN.5, ZN.6, DOR.8
10 PLIP interactions:10 interactions with chain B- Hydrogen bonds: B:N.44, B:L.222, B:D.250
- Salt bridges: B:H.16, B:H.18, B:H.18, B:R.20, B:H.139, B:H.177, B:H.254
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Lee, M. et al., Kinetic and Structural Analysis of Mutant Escherichia coli Dihydroorotases: A Flexible Loop Stabilizes the Transition State. Biochemistry (2007)
- Release Date
- 2007-10-09
- Peptides
- Dihydroorotase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.29 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x ZN: ZINC ION(Non-covalent)
- 2 x DOR: (4S)-2,6-DIOXOHEXAHYDROPYRIMIDINE-4-CARBOXYLIC ACID(Non-covalent)
- 1 x MLI: MALONATE ION(Non-functional Binders)
- 1 x NCD: N-CARBAMOYL-L-ASPARTATE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Lee, M. et al., Kinetic and Structural Analysis of Mutant Escherichia coli Dihydroorotases: A Flexible Loop Stabilizes the Transition State. Biochemistry (2007)
- Release Date
- 2007-10-09
- Peptides
- Dihydroorotase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B