SMTL ID : 2z3b.2 (1 other biounit)

Crystal Structure of Bacillus Subtilis CodW, a non-canonical HslV-like peptidase with an impaired catalytic apparatus

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-12-mer

Ligands

12 x NA: SODIUM ION(Non-functional Binders)

NA.1: 3 residues within 4Å: Chain A: G.164, C.167, T.170 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.164 NA.2: 3 residues within 4Å: Chain B: G.164, C.167, T.170 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:G.164 NA.3: 3 residues within 4Å: Chain C: G.164, C.167, T.170 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:G.164 NA.4: 3 residues within 4Å: Chain D: G.164, C.167, T.170 No protein-ligand interaction detected (PLIP) NA.5: 3 residues within 4Å: Chain E: G.164, C.167 Chain G: V.32 1 PLIP interactions: 1 interactions with chain E Hydrogen bonds: E:C.167 NA.6: 3 residues within 4Å: Chain F: G.164, C.167, T.170 1 PLIP interactions: 1 interactions with chain F Hydrogen bonds: F:T.170 NA.7: 3 residues within 4Å: Chain G: G.164, C.167, T.170 1 PLIP interactions: 1 interactions with chain G Hydrogen bonds: G:G.164 NA.8: 3 residues within 4Å: Chain H: G.164, C.167, T.170 1 PLIP interactions: 1 interactions with chain H Hydrogen bonds: H:C.167 NA.9: 3 residues within 4Å: Chain I: G.164, C.167, T.170 No protein-ligand interaction detected (PLIP) NA.10: 3 residues within 4Å: Chain J: G.164, C.167, T.170 1 PLIP interactions: 1 interactions with chain J Hydrogen bonds: J:G.164 NA.11: 3 residues within 4Å: Chain A: V.32 Chain K: G.164, C.167 1 PLIP interactions: 1 interactions with chain K Hydrogen bonds: K:G.164 NA.12: 3 residues within 4Å: Chain L: G.164, C.167, T.170 1 PLIP interactions: 1 interactions with chain L Hydrogen bonds: L:C.167

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rho, S.H. et al., Crystal structure of Bacillus subtilis CodW, a noncanonical HslV-like peptidase with an impaired catalytic apparatus. Proteins (2007)

Release Date

2008-03-25

Peptides

ATP-dependent protease hslV: ABCDEFGHIJKL

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
G

B
H

C
I

D
J

E
K

F
L

G
G

H
H

I
I

J
J

K
K

L
L

ATP-dependent protease hslV

Related Entries With Identical Sequence