SMTL ID : 2z3w.1

Prolyl tripeptidyl aminopeptidase mutant E636A

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 1 residues within 4Å: Chain A: R.295 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.295 SO4.3: 1 residues within 4Å: Chain B: R.295 1 PLIP interactions: 1 interactions with chain B Salt bridges: B:R.295

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 7 residues within 4Å: Chain A: Y.492, S.577, Y.578, V.603, Y.609, Y.613, V.655 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:Y.492, A:Y.578 Water bridges: A:Y.492, A:Y.492, A:Y.492, A:S.577, A:S.577 GOL.4: 7 residues within 4Å: Chain B: Y.492, S.577, Y.578, V.603, Y.609, Y.613, V.655 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:Y.492, B:Y.492, B:Y.578, B:Y.609, B:Y.613 Water bridges: B:S.577, B:S.577

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xu, Y. et al., Novel inhibitor for prolyl tripeptidyl aminopeptidase from Porphyromonas gingivalis and details of substrate-recognition mechanism. J.Mol.Biol. (2008)

Release Date

2008-02-19

Peptides

Dipeptidyl aminopeptidase IV: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Dipeptidyl aminopeptidase IV

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