SMTL ID : 2z4r.3 (2 other biounits)

Crystal structure of domain III from the Thermotoga maritima replication initiation protein DnaA

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.05 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 4 residues within 4Å: Chain A: T.144, D.201, D.202 Ligands: ADP.2 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:T.144, A:D.202

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.2: 18 residues within 4Å: Chain A: Y.102, N.106, F.107, V.108, N.113, G.138, V.139, G.140, L.141, G.142, K.143, T.144, H.145, I.271, L.299, R.300, R.303 Ligands: MG.1 17 PLIP interactions: 17 interactions with chain A Hydrogen bonds: A:Y.102, A:V.108, A:V.108, A:G.140, A:L.141, A:G.142, A:K.143, A:T.144, A:T.144, A:H.145, A:H.145, A:R.303 Salt bridges: A:K.143, A:R.300, A:R.300 pi-Cation interactions: A:H.145, A:H.145

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ozaki, S. et al., A Common Mechanism for the ATP-DnaA-dependent Formation of Open Complexes at the Replication Origin. J.Biol.Chem. (2008)

Release Date

2008-02-19

Peptides

Chromosomal replication initiator protein dnaA: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

Chromosomal replication initiator protein dnaA

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