SMTL ID : 2z65.3 (3 other biounits)

Crystal structure of the human TLR4 TV3 hybrid-MD-2-Eritoran complex

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

monomer

Ligands

1 x E55: 3-O-DECYL-2-DEOXY-6-O-{2-DEOXY-3-O-[(3R)-3-METHOXYDECYL]-6-O-METHYL-2-[(11Z)-OCTADEC-11-ENOYLAMINO]-4-O-PHOSPHONO-BETA-D-GLUCOPYRANOSYL}-2-[(3-OXOTETRADECANOYL)AMINO]-1-O-PHOSPHONO-ALPHA-D-GLUCOPYRANOSE(Non-covalent)

E55.1: 16 residues within 4Å: Chain A: I.28, L.43, I.45, Y.47, F.58, L.69, Y.84, F.86, I.99, S.100, F.101, S.102, F.103, G.105, C.115, F.133 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:I.28, A:L.43, A:I.45, A:Y.47, A:F.58, A:F.86, A:I.99, A:I.99, A:F.101, A:F.101, A:F.103, A:F.133 Hydrogen bonds: A:S.102

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kim, H.M. et al., Crystal Structure of the TLR4-MD-2 Complex with Bound Endotoxin Antagonist Eritoran. Cell(Cambridge,Mass.) (2007)

Release Date

2007-09-18

Peptides

Lymphocyte antigen 96: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

Lymphocyte antigen 96

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