- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.40 Å
- Oligo State
- monomer
- Ligands
- 10 x CA: CALCIUM ION(Non-covalent)
- 6 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)
MPD.11: 4 residues within 4Å:- Chain A: S.85, W.87, H.92, Q.127
3 PLIP interactions:3 interactions with chain A- Hydrophobic interactions: A:W.87
- Hydrogen bonds: A:W.87
- Water bridges: A:S.85
MPD.12: 6 residues within 4Å:- Chain A: N.167, K.170, G.201, K.203, V.209, A.213
6 PLIP interactions:6 interactions with chain A- Hydrophobic interactions: A:V.209
- Hydrogen bonds: A:K.170, A:A.213
- Water bridges: A:N.167, A:K.203, A:N.214
MPD.13: 5 residues within 4Å:- Chain A: S.143, N.263, R.264, R.267, Y.289
7 PLIP interactions:7 interactions with chain A- Hydrophobic interactions: A:Y.289, A:Y.289
- Hydrogen bonds: A:N.263, A:N.263, A:R.267
- Water bridges: A:D.141, A:S.143
MPD.14: 1 residues within 4Å:- Chain A: E.220
2 PLIP interactions:2 interactions with chain A- Water bridges: A:E.220, A:E.220
MPD.15: 2 residues within 4Å:- Chain A: K.440, V.442
2 PLIP interactions:2 interactions with chain A- Hydrophobic interactions: A:K.440, A:V.442
MPD.16: 5 residues within 4Å:- Chain A: D.332, V.333, D.370, G.377, L.378
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:S.565
- Water bridges: A:D.370, A:G.377
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Ochiai, A. et al., A Novel Structural Fold in Polysaccharide Lyases: BACILLUS SUBTILIS FAMILY 11 RHAMNOGALACTURONAN LYASE YesW WITH AN EIGHT-BLADED -PROPELLER. J.Biol.Chem. (2007)
- Release Date
- 2007-10-16
- Peptides
- YesW protein: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.40 Å
- Oligo State
- monomer
- Ligands
- 10 x CA: CALCIUM ION(Non-covalent)
- 6 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Ochiai, A. et al., A Novel Structural Fold in Polysaccharide Lyases: BACILLUS SUBTILIS FAMILY 11 RHAMNOGALACTURONAN LYASE YesW WITH AN EIGHT-BLADED -PROPELLER. J.Biol.Chem. (2007)
- Release Date
- 2007-10-16
- Peptides
- YesW protein: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A