SMTL ID : 2za8.1

recombinant horse L-chain apoferritin N-terminal deletion mutant (residues 1-8)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

homo-24-mer

Ligands

48 x CD: CADMIUM ION(Non-covalent)

CD.1: 4 residues within 4Å: Chain A: D.31, E.38, C.41 Ligands: CD.2 Ligand excluded by PLIP CD.2: 3 residues within 4Å: Chain A: E.38, H.42 Ligands: CD.1 Ligand excluded by PLIP CD.3: 4 residues within 4Å: Chain B: D.31, E.38, C.41 Ligands: CD.4 Ligand excluded by PLIP CD.4: 3 residues within 4Å: Chain B: E.38, H.42 Ligands: CD.3 Ligand excluded by PLIP CD.5: 4 residues within 4Å: Chain C: D.31, E.38, C.41 Ligands: CD.6 Ligand excluded by PLIP CD.6: 3 residues within 4Å: Chain C: E.38, H.42 Ligands: CD.5 Ligand excluded by PLIP CD.7: 4 residues within 4Å: Chain D: D.31, E.38, C.41 Ligands: CD.8 Ligand excluded by PLIP CD.8: 3 residues within 4Å: Chain D: E.38, H.42 Ligands: CD.7 Ligand excluded by PLIP CD.9: 4 residues within 4Å: Chain E: D.31, E.38, C.41 Ligands: CD.10 Ligand excluded by PLIP CD.10: 3 residues within 4Å: Chain E: E.38, H.42 Ligands: CD.9 Ligand excluded by PLIP CD.11: 4 residues within 4Å: Chain F: D.31, E.38, C.41 Ligands: CD.12 Ligand excluded by PLIP CD.12: 3 residues within 4Å: Chain F: E.38, H.42 Ligands: CD.11 Ligand excluded by PLIP CD.13: 4 residues within 4Å: Chain G: D.31, E.38, C.41 Ligands: CD.14 Ligand excluded by PLIP CD.14: 3 residues within 4Å: Chain G: E.38, H.42 Ligands: CD.13 Ligand excluded by PLIP CD.15: 4 residues within 4Å: Chain H: D.31, E.38, C.41 Ligands: CD.16 Ligand excluded by PLIP CD.16: 3 residues within 4Å: Chain H: E.38, H.42 Ligands: CD.15 Ligand excluded by PLIP CD.17: 4 residues within 4Å: Chain I: D.31, E.38, C.41 Ligands: CD.18 Ligand excluded by PLIP CD.18: 3 residues within 4Å: Chain I: E.38, H.42 Ligands: CD.17 Ligand excluded by PLIP CD.19: 4 residues within 4Å: Chain J: D.31, E.38, C.41 Ligands: CD.20 Ligand excluded by PLIP CD.20: 3 residues within 4Å: Chain J: E.38, H.42 Ligands: CD.19 Ligand excluded by PLIP CD.21: 4 residues within 4Å: Chain K: D.31, E.38, C.41 Ligands: CD.22 Ligand excluded by PLIP CD.22: 3 residues within 4Å: Chain K: E.38, H.42 Ligands: CD.21 Ligand excluded by PLIP CD.23: 4 residues within 4Å: Chain L: D.31, E.38, C.41 Ligands: CD.24 Ligand excluded by PLIP CD.24: 3 residues within 4Å: Chain L: E.38, H.42 Ligands: CD.23 Ligand excluded by PLIP CD.25: 4 residues within 4Å: Chain M: D.31, E.38, C.41 Ligands: CD.26 Ligand excluded by PLIP CD.26: 3 residues within 4Å: Chain M: E.38, H.42 Ligands: CD.25 Ligand excluded by PLIP CD.27: 4 residues within 4Å: Chain N: D.31, E.38, C.41 Ligands: CD.28 Ligand excluded by PLIP CD.28: 3 residues within 4Å: Chain N: E.38, H.42 Ligands: CD.27 Ligand excluded by PLIP CD.29: 4 residues within 4Å: Chain O: D.31, E.38, C.41 Ligands: CD.30 Ligand excluded by PLIP CD.30: 3 residues within 4Å: Chain O: E.38, H.42 Ligands: CD.29 Ligand excluded by PLIP CD.31: 4 residues within 4Å: Chain P: D.31, E.38, C.41 Ligands: CD.32 Ligand excluded by PLIP CD.32: 3 residues within 4Å: Chain P: E.38, H.42 Ligands: CD.31 Ligand excluded by PLIP CD.33: 4 residues within 4Å: Chain Q: D.31, E.38, C.41 Ligands: CD.34 Ligand excluded by PLIP CD.34: 3 residues within 4Å: Chain Q: E.38, H.42 Ligands: CD.33 Ligand excluded by PLIP CD.35: 4 residues within 4Å: Chain R: D.31, E.38, C.41 Ligands: CD.36 Ligand excluded by PLIP CD.36: 3 residues within 4Å: Chain R: E.38, H.42 Ligands: CD.35 Ligand excluded by PLIP CD.37: 4 residues within 4Å: Chain S: D.31, E.38, C.41 Ligands: CD.38 Ligand excluded by PLIP CD.38: 3 residues within 4Å: Chain S: E.38, H.42 Ligands: CD.37 Ligand excluded by PLIP CD.39: 4 residues within 4Å: Chain T: D.31, E.38, C.41 Ligands: CD.40 Ligand excluded by PLIP CD.40: 3 residues within 4Å: Chain T: E.38, H.42 Ligands: CD.39 Ligand excluded by PLIP CD.41: 4 residues within 4Å: Chain U: D.31, E.38, C.41 Ligands: CD.42 Ligand excluded by PLIP CD.42: 3 residues within 4Å: Chain U: E.38, H.42 Ligands: CD.41 Ligand excluded by PLIP CD.43: 4 residues within 4Å: Chain V: D.31, E.38, C.41 Ligands: CD.44 Ligand excluded by PLIP CD.44: 3 residues within 4Å: Chain V: E.38, H.42 Ligands: CD.43 Ligand excluded by PLIP CD.45: 4 residues within 4Å: Chain W: D.31, E.38, C.41 Ligands: CD.46 Ligand excluded by PLIP CD.46: 3 residues within 4Å: Chain W: E.38, H.42 Ligands: CD.45 Ligand excluded by PLIP CD.47: 4 residues within 4Å: Chain X: D.31, E.38, C.41 Ligands: CD.48 Ligand excluded by PLIP CD.48: 3 residues within 4Å: Chain X: E.38, H.42 Ligands: CD.47 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yoshizawa, K. et al., Effect of N-terminal Residues on the Structural Stability of Recombinant Horse L-chain Apoferritin in an Acidic Environment. J.BIOCHEM.(TOKYO) (2007)

Release Date

2008-01-22

Peptides

Ferritin light chain: ABCDEFGHIJKLMNOPQRSTUVWX

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

E
A

F
A

G
A

H
A

I
A

J
A

K
A

L
A

M
A

N
A

O
A

P
A

Q
A

R
A

S
A

T
A

U
A

V
A

W
A

X
A

Ferritin light chain