SMTL ID : 2ze3.1

Crystal Structure of DFA0005 Complexed with alpha-Ketoglutarate: A Novel Member of the ICL/PEPM Superfamily from Alkali-tolerant Deinococcus ficus

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

homo-dimer

Ligands

2 x AKG: 2-OXOGLUTARIC ACID(Non-covalent)

AKG.1: 13 residues within 4Å: Chain A: N.22, T.42, T.43, S.44, A.45, D.82, N.110, R.151, F.186, S.230, F.231, G.232, Q.233 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:N.22, A:S.44, A:S.44, A:A.45, A:N.110, A:R.151, A:S.230, A:G.232 Water bridges: A:S.44, A:E.84, A:N.208, A:Q.233 AKG.2: 13 residues within 4Å: Chain B: N.22, T.42, T.43, S.44, A.45, D.82, N.110, R.151, F.186, S.230, F.231, G.232, Q.233 13 PLIP interactions: 13 interactions with chain B Hydrogen bonds: B:N.22, B:T.43, B:S.44, B:S.44, B:A.45, B:N.110, B:R.151, B:S.230, B:G.232 Water bridges: B:S.44, B:E.84, B:N.208, B:Q.233

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liao, C.J. et al., Crystal structure of DFA0005 complexed with alpha-ketoglutarate: a novel member of the ICL/PEPM superfamily from alkali-tolerant Deinococcus ficus. Proteins (2008)

Release Date

2008-08-12

Peptides

DFA0005: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

DFA0005