SMTL ID : 2zoe.1

HA3 subcomponent of Clostridium botulinum type C progenitor toxin, complex with N-acetylneuramic acid

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

hetero-3-3-mer

Ligands

3 x SLB: N-acetyl-beta-neuraminic acid(Non-covalent)

SLB.1: 10 residues within 4Å: Chain B: R.257, D.259, D.310, N.311, T.317, H.318, Y.319, Y.320, T.321, R.322 13 PLIP interactions: 13 interactions with chain B Hydrogen bonds: B:R.257, B:D.259, B:D.259, B:D.310, B:N.311, B:N.311, B:T.317, B:Y.319, B:T.321, B:T.321, B:R.322, B:R.322 Salt bridges: B:R.257 SLB.2: 10 residues within 4Å: Chain D: R.257, D.259, D.310, N.311, T.317, H.318, Y.319, Y.320, T.321, R.322 13 PLIP interactions: 13 interactions with chain D Hydrogen bonds: D:R.257, D:D.259, D:D.259, D:D.310, D:N.311, D:N.311, D:T.317, D:Y.319, D:T.321, D:T.321, D:R.322, D:R.322 Salt bridges: D:R.257 SLB.3: 10 residues within 4Å: Chain F: R.257, D.259, D.310, N.311, T.317, H.318, Y.319, Y.320, T.321, R.322 13 PLIP interactions: 13 interactions with chain F Hydrogen bonds: F:R.257, F:D.259, F:D.259, F:D.310, F:N.311, F:N.311, F:T.317, F:Y.319, F:T.321, F:T.321, F:R.322, F:R.322 Salt bridges: F:R.257

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nakamura, T. et al., Crystal Structure of the HA3 Subcomponent of Clostridium botulinum Type C Progenitor Toxin. J.Mol.Biol. (2009)

Release Date

2008-12-02

Peptides

Hemagglutinin components HA3: ACE
Hemagglutinin components HA3: BDF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
A

E
A

B
B

D
B

F
B

Hemagglutinin components HA3

Hemagglutinin components HA3

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