- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.80 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x AMP: ADENOSINE MONOPHOSPHATE(Non-covalent)
- 7 x SO4: SULFATE ION(Non-functional Binders)
SO4.2: 5 residues within 4Å:- Chain A: S.183, R.184, T.288, A.289, H.300
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:S.183, A:S.183, A:K.284
- Salt bridges: A:R.184, A:H.300
SO4.3: 6 residues within 4Å:- Chain A: K.291, D.292, T.293, R.298, R.369
- Ligands: SO4.4
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:D.292, A:D.292, A:T.293
- Salt bridges: A:R.298, A:R.369
SO4.4: 6 residues within 4Å:- Chain A: F.297, R.298, R.369, E.370, R.412
- Ligands: SO4.3
6 PLIP interactions:6 interactions with chain A- Hydrogen bonds: A:E.370, A:E.370
- Water bridges: A:E.370
- Salt bridges: A:R.298, A:R.369, A:R.412
SO4.5: 4 residues within 4Å:- Chain A: A.172, D.173, F.174, A.175
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:D.173, A:F.174, A:A.175
SO4.7: 5 residues within 4Å:- Chain B: S.183, R.184, T.288, A.289, H.300
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:S.183, B:S.183, B:T.288
- Salt bridges: B:R.184, B:H.300
SO4.8: 6 residues within 4Å:- Chain B: K.291, D.292, T.293, F.297, R.298, R.369
7 PLIP interactions:7 interactions with chain B- Hydrogen bonds: B:D.292, B:D.292, B:T.293, B:T.293
- Salt bridges: B:K.291, B:R.298, B:R.369
SO4.9: 6 residues within 4Å:- Chain B: E.120, F.297, R.298, R.369, E.370, R.412
6 PLIP interactions:6 interactions with chain B- Hydrogen bonds: B:E.370
- Water bridges: B:R.369, B:R.369
- Salt bridges: B:R.298, B:R.369, B:R.412
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Itoh, Y. et al., Crystallographic and mutational studies of seryl-tRNA synthetase from the archaeon Pyrococcus horikoshii. Rna Biol. (2008)
- Release Date
- 2008-09-09
- Peptides
- Seryl-tRNA synthetase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.80 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x AMP: ADENOSINE MONOPHOSPHATE(Non-covalent)
- 7 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Itoh, Y. et al., Crystallographic and mutational studies of seryl-tRNA synthetase from the archaeon Pyrococcus horikoshii. Rna Biol. (2008)
- Release Date
- 2008-09-09
- Peptides
- Seryl-tRNA synthetase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B