SMTL ID : 3a1i.1

Crystal structure of Rhodococcus sp. N-771 Amidase complexed with Benzamide

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.32 Å

Oligo State

homo-dimer

Ligands

2 x UNU: BENZAMIDE(Non-covalent)

UNU.1: 12 residues within 4Å: Chain A: C.145, F.146, S.147, G.148, G.170, S.171, Q.192, G.193, G.194, A.195, W.328, I.450 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:W.328, A:I.450 Hydrogen bonds: A:S.171, A:Q.192, A:G.193, A:G.194, A:G.194, A:A.195 Water bridges: A:S.171 pi-Stacking: A:F.146 UNU.2: 12 residues within 4Å: Chain B: C.145, F.146, S.147, G.148, G.170, S.171, Q.192, G.193, G.194, A.195, W.328, I.450 10 PLIP interactions: 10 interactions with chain B Hydrophobic interactions: B:W.328, B:I.450 Hydrogen bonds: B:S.171, B:Q.192, B:G.193, B:G.194, B:G.194, B:A.195 Water bridges: B:S.171 pi-Stacking: B:F.146

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ohtaki, A. et al., Structure and Characterization of Amidase from Rhodococcus sp. N-771: Insight into the Molecular Mechanism of Substrate Recognition. Biochim.Biophys.Acta (2009)

Release Date

2009-10-27

Peptides

Amidase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Amidase