SMTL ID : 3a29.1 (4 other biounits)

Crystal structure of human liver FBPase in complex with tricyclic inhibitor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

homo-tetramer

Ligands

4 x 2T0: 2-amino-4,5-dihydronaphtho[1,2-d][1,3]thiazol-8-yl dihydrogen phosphate(Non-covalent)

2T0.1: 14 residues within 4Å: Chain A: V.17, E.20, G.21, A.24, G.26, T.27, G.28, E.29, L.30, T.31, K.112, Y.113, R.140, M.177 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:A.24, A:L.30, A:L.30 Hydrogen bonds: A:T.27, A:G.28, A:E.29, A:L.30, A:T.31, A:T.31, A:R.140 Water bridges: A:G.26, A:T.31, A:T.31 Salt bridges: A:K.112 2T0.2: 15 residues within 4Å: Chain B: V.17, E.20, G.21, A.24, G.26, T.27, G.28, E.29, L.30, T.31, L.34, K.112, Y.113, R.140, M.177 13 PLIP interactions: 13 interactions with chain B Hydrophobic interactions: B:A.24, B:L.30, B:L.30 Hydrogen bonds: B:T.27, B:G.28, B:E.29, B:L.30, B:T.31, B:T.31 Water bridges: B:G.26, B:T.31, B:T.31 Salt bridges: B:K.112 2T0.3: 15 residues within 4Å: Chain C: V.17, E.20, G.21, A.24, G.26, T.27, G.28, E.29, L.30, T.31, L.34, K.112, Y.113, R.140, M.177 14 PLIP interactions: 14 interactions with chain C Hydrophobic interactions: C:A.24, C:L.30, C:L.30 Hydrogen bonds: C:T.27, C:G.28, C:E.29, C:L.30, C:T.31, C:Y.113 Water bridges: C:G.26, C:T.31, C:T.31, C:K.112 Salt bridges: C:K.112 2T0.4: 14 residues within 4Å: Chain D: V.17, E.20, G.21, A.24, G.26, T.27, G.28, E.29, L.30, T.31, K.112, Y.113, R.140, M.177 15 PLIP interactions: 15 interactions with chain D Hydrophobic interactions: D:A.24, D:L.30, D:L.30 Hydrogen bonds: D:G.26, D:T.27, D:G.28, D:E.29, D:L.30, D:T.31, D:Y.113 Water bridges: D:G.26, D:G.28, D:T.31 Salt bridges: D:K.112, D:R.140

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tsukada, T. et al., Synthesis, SAR, and X-ray structure of tricyclic compounds as potent FBPase inhibitors. Bioorg.Med.Chem.Lett. (2009)

Release Date

2009-10-06

Peptides

Fructose-1,6-bisphosphatase 1: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Fructose-1,6-bisphosphatase 1

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