SMTL ID : 3a2l.1

Crystal structure of DBJA (mutant dbja delta)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.78 Å

Oligo State

homo-dimer

Ligands

2 x GLC- FRU: beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose(Non-covalent)

GLC-FRU.1: 8 residues within 4Å: Chain A: P.30, V.55, A.292, E.295, A.296 Chain B: R.262, C.263, A.264 3 PLIP interactions: 1 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:C.263, A:E.295, B:R.262 Water bridges: B:R.262, B:C.263, A:A.292 GLC-FRU.2: 9 residues within 4Å: Chain A: R.262, C.263, A.264 Chain B: P.30, V.55, A.292, E.295, A.296 Ligands: GOL.4 3 PLIP interactions: 1 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:C.263, B:E.295, B:E.295, A:R.262 Water bridges: A:R.262, A:C.263, B:P.54, B:A.292

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 5 residues within 4Å: Chain A: N.38, W.104, F.169, F.206, P.207 Ligand excluded by PLIP CL.5: 5 residues within 4Å: Chain B: N.38, W.104, F.169, F.206, P.207 Ligand excluded by PLIP

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.4: 2 residues within 4Å: Chain A: C.263 Ligands: GLC-FRU.2 2 PLIP interactions: 2 interactions with chain A Water bridges: A:L.265, A:L.265

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Prokop, Z. et al., Enantioselectivity of haloalkane dehalogenases and its modulation by surface loop engineering. Angew.Chem.Int.Ed.Engl. (2010)

Release Date

2010-05-26

Peptides

Haloalkane dehalogenase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Haloalkane dehalogenase