SMTL ID : 3a2q.1 (1 other biounit)

Structure of 6-aminohexanoate cyclic dimer hydrolase complexed with substrate

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

2 x ACA: 6-AMINOHEXANOIC ACID(Non-covalent)

ACA.1: 9 residues within 4Å: Chain A: M.123, G.124, N.125, S.150, A.171, A.174, V.206, I.320 Ligands: ACA.2 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:A.171, A:V.206 Hydrogen bonds: A:G.124, A:N.125, A:S.150 ACA.2: 12 residues within 4Å: Chain A: G.124, N.125, Q.126, S.150, D.170, A.171, A.172, A.174, C.316, Q.411, F.414 Ligands: ACA.1 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:A.172, A:A.174, A:F.414 Hydrogen bonds: A:N.125, A:A.171, A:A.172, A:G.173, A:A.174

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 4 residues within 4Å: Chain A: N.266, G.269, F.271, A.272 1 PLIP interactions: 1 interactions with chain A Water bridges: A:L.273

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yasuhira, K. et al., X-ray crystallographic analysis of the 6-aminohexanoate cyclic dimer hydrolase: catalytic mechanism and evolution of an enzyme responsible for nylon-6 byproduct degradation. J.Biol.Chem. (2010)

Release Date

2009-11-03

Peptides

6-aminohexanoate-cyclic-dimer hydrolase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

6-aminohexanoate-cyclic-dimer hydrolase

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