SMTL ID : 3a3d.1

Crystal structure of penicillin binding protein 4 (dacB) from Haemophilus influenzae

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

homo-dimer

Ligands

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 5 residues within 4Å: Chain A: N.113, G.114, D.115, G.251, K.252 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.113, A:D.115, A:K.252 Water bridges: A:K.252 GOL.2: 5 residues within 4Å: Chain A: Q.228, N.229, T.230, D.231, L.255 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:Q.228, A:T.230, A:D.231, A:D.231 Water bridges: A:D.127, A:D.127, A:A.232 GOL.3: 7 residues within 4Å: Chain A: M.364, N.390, I.392, F.407, M.408, T.409, K.415 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.390, A:T.409, A:T.409, A:K.415 GOL.4: 5 residues within 4Å: Chain B: R.94, Y.98, I.237, Q.241, K.244 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:R.94, B:Q.241 Water bridges: B:R.240

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kawai, F. et al., Crystal structures of penicillin-binding proteins 4 and 5 from Haemophilus influenzae. J.Mol.Biol. (2010)

Release Date

2009-12-22

Peptides

Penicillin-binding protein 4: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Penicillin-binding protein 4

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