SMTL ID : 3a3g.1 (1 other biounit)

Crystal structure of LumP complexed with 6,7-dimethyl-8-(1'-D-ribityl) lumazine

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x DLZ: 1-deoxy-1-(6,7-dimethyl-2,4-dioxo-3,4-dihydropteridin-8(2H)-yl)-D-ribitol(Non-covalent)

DLZ.1: 15 residues within 4Å: Chain A: V.41, C.47, S.48, L.49, T.50, D.62, I.63, D.64, Q.65, A.66, T.69, T.70, G.100, N.101, I.102 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:V.41 Hydrogen bonds: A:S.48, A:S.48, A:T.50, A:D.62, A:D.64, A:D.64, A:A.66, A:T.69, A:G.100, A:I.102

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sato, Y. et al., Crystal structures of the lumazine protein from Photobacterium kishitanii in complexes with the authentic chromophore, 6,7-dimethyl-8-(1'-D-ribityl) lumazine and its analogues, riboflavin and FMN, at high resolution. J.Bacteriol. (2009)

Release Date

2009-11-10

Peptides

Lumazine protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Lumazine protein

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