SMTL ID : 3ahm.2 (1 other biounit)

Pz peptidase a

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: H.356, H.360, E.384, S.387, Y.490 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.356, A:H.360, A:E.384, H2O.9, H2O.9

2 x ACT: ACETATE ION(Non-functional Binders)

ACT.2: 3 residues within 4Å: Chain A: R.171, K.265, Y.267 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:Y.267 Water bridges: A:R.171, A:K.265, A:K.265, A:K.265, A:K.265 Salt bridges: A:R.171, A:K.265 ACT.3: 2 residues within 4Å: Chain A: R.47, V.88 3 PLIP interactions: 3 interactions with chain A Water bridges: A:R.47, A:R.47 Salt bridges: A:R.47

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kawasaki, A. et al., The exquisite structure and reaction mechanism of bacterial Pz-peptidase A toward collagenous peptides: X-ray crystallographic structure analysis of PZ-peptidase a reveals differences from mammalian thimet oligopeptidase. J.Biol.Chem. (2010)

Release Date

2010-08-25

Peptides

Oligopeptidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Oligopeptidase

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