SMTL ID : 3axd.1 (1 other biounit)

The truncated Fibrobacter succinogenes 1,3-1,4-beta-D-glucanase V18Y/W203Y in apo-form

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.53 Å

Oligo State

monomer

Ligands

1 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)

TRS.1: 9 residues within 4Å: Chain A: V.36, S.38, F.40, E.56, D.58, E.60, N.139, W.141, F.205 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.38, A:S.38, A:E.56, A:N.139

6 x CA: CALCIUM ION(Non-covalent)

CA.2: 2 residues within 4Å: Chain A: F.152, E.154 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:F.152, A:E.154, H2O.1, H2O.1, H2O.1 CA.3: 3 residues within 4Å: Chain A: N.164, N.189, G.222 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:N.164, A:N.189, A:G.222, H2O.1, H2O.1 CA.4: 2 residues within 4Å: Chain A: K.200, D.202 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:K.200, A:D.202, H2O.1, H2O.1, H2O.1 CA.5: 1 residues within 4Å: Chain A: D.185 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.185, A:D.185, H2O.1, H2O.1 CA.6: 2 residues within 4Å: Chain A: M.4, D.6 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:M.4, A:D.6, H2O.8, H2O.13, H2O.14 CA.7: 1 residues within 4Å: Chain A: N.129 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Huang, J.W. et al., Rational design to improve thermostability and specific activity of the truncated Fibrobacter succinogenes 1,3-1,4-beta-D-glucanase. Appl.Microbiol.Biotechnol. (2012)

Release Date

2012-02-15

Peptides

Beta-glucanase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-glucanase

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