SMTL ID : 3bhy.1

Crystal structure of human death associated protein kinase 3 (DAPK3) in complex with a beta-carboline ligand

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.24 Å

Oligo State

monomer

Ligands

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 4 residues within 4Å: Chain A: A.34, E.88, V.90 Ligands: 7CP.2 Ligand excluded by PLIP

1 x 7CP: (4R)-7,8-dichloro-1',9-dimethyl-1-oxo-1,2,4,9-tetrahydrospiro[beta-carboline-3,4'-piperidine]-4-carbonitrile(Non-covalent)

7CP.2: 17 residues within 4Å: Chain A: L.13, G.14, A.19, V.21, A.34, K.36, I.71, L.87, E.88, V.90, E.94, E.137, N.138, M.140, I.154, D.155 Ligands: CL.1 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:V.21, A:L.87, A:I.154 Hydrogen bonds: A:S.15 Water bridges: A:K.36 Salt bridges: A:E.94, A:D.155 Halogen bonds: A:V.90

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Huber, K. et al., 7,8-dichloro-1-oxo-beta-carbolines as a versatile scaffold for the development of potent and selective kinase inhibitors with unusual binding modes. J.Med.Chem. (2012)

Release Date

2007-12-25

Peptides

Death-associated protein kinase 3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Death-associated protein kinase 3

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