SMTL ID : 3bl9.1

Synthetic Gene Encoded DcpS bound to inhibitor DG157493

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

1 x DD2: 5-{[1-(2,3-dichlorobenzyl)piperidin-4-yl]methoxy}quinazoline-2,4-diamine(Non-covalent)

DD2.1: 16 residues within 4Å: Chain A: R.18, F.27, K.106, Y.107, W.139, I.143, E.149, R.152, P.168, D.169, L.170, I.183, S.236 Chain B: F.72, N.74, Y.77 14 PLIP interactions: 11 interactions with chain A, 3 interactions with chain B Hydrophobic interactions: A:K.106, A:Y.107, A:W.139, A:L.170, B:N.74, B:Y.77 Hydrogen bonds: A:R.152, A:P.168, A:D.169, A:L.170 Salt bridges: A:E.149, A:D.169 pi-Stacking: A:W.139, B:Y.77

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Singh, J. et al., DcpS as a therapeutic target for spinal muscular atrophy. Acs Chem.Biol. (2008)

Release Date

2008-10-21

Peptides

Scavenger mRNA-decapping enzyme DcpS: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Scavenger mRNA-decapping enzyme DcpS

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