SMTL ID : 3bv8.2 (1 other biounit)

Crystal structure of the N-terminal domain of tetrahydrodipicolinate acetyltransferase from Staphylococcus aureus

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

homo-hexamer

Ligands

6 x NA: SODIUM ION(Non-functional Binders)

NA.1: 3 residues within 4Å: Chain A: K.17, F.19, N.79 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:A.16 NA.3: 3 residues within 4Å: Chain B: K.17, F.19, N.79 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.79 NA.5: 3 residues within 4Å: Chain C: K.17, F.19, N.79 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:A.16 NA.7: 3 residues within 4Å: Chain D: K.17, F.19, N.79 1 PLIP interactions: 1 interactions with chain D Hydrogen bonds: D:N.79 NA.9: 3 residues within 4Å: Chain E: K.17, F.19, N.79 1 PLIP interactions: 1 interactions with chain E Hydrogen bonds: E:A.16 NA.11: 3 residues within 4Å: Chain F: K.17, F.19, N.79 1 PLIP interactions: 1 interactions with chain F Hydrogen bonds: F:K.17

6 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 5 residues within 4Å: Chain A: Y.61, G.65, F.68, E.69, I.71 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:F.68 Water bridges: A:F.68, A:E.69 GOL.4: 5 residues within 4Å: Chain B: Y.61, G.65, F.68, E.69, I.71 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:F.68 Water bridges: B:F.68, B:E.69 GOL.6: 5 residues within 4Å: Chain C: Y.61, G.65, F.68, E.69, I.71 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:F.68 Water bridges: C:F.68, C:E.69 GOL.8: 5 residues within 4Å: Chain D: Y.61, G.65, F.68, E.69, I.71 4 PLIP interactions: 4 interactions with chain D Hydrogen bonds: D:Y.61, D:F.68 Water bridges: D:F.68, D:E.69 GOL.10: 5 residues within 4Å: Chain E: Y.61, G.65, F.68, E.69, I.71 4 PLIP interactions: 4 interactions with chain E Hydrogen bonds: E:Y.61, E:F.68 Water bridges: E:F.68, E:E.69 GOL.12: 5 residues within 4Å: Chain F: Y.61, G.65, F.68, E.69, I.71 4 PLIP interactions: 4 interactions with chain F Hydrogen bonds: F:Y.61, F:F.68 Water bridges: F:F.68, F:E.69

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cuff, M.E. et al., Structure of the N-terminal domain of tetrahydrodipicolinate acetyltransferase from Staphylococcus aureus. TO BE PUBLISHED

Release Date

2008-02-05

Peptides

Tetrahydrodipicolinate acetyltransferase: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

E
A

F
A

Tetrahydrodipicolinate acetyltransferase

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