SMTL ID : 3cei.1

Crystal Structure of Superoxide Dismutase from Helicobacter pylori

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

2 x FE: FE (III) ION(Non-covalent)

FE.1: 4 residues within 4Å: Chain A: H.26, H.73, D.156, H.160 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.26, A:H.73, A:D.156, A:H.160, H2O.1 FE.3: 4 residues within 4Å: Chain B: H.26, H.73, D.156, H.160 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:H.26, B:H.73, B:D.156, B:H.160, H2O.4

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 6 residues within 4Å: Chain A: M.14, G.15, D.16, F.17, K.176, H.180 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:D.16 Water bridges: A:H.180 Salt bridges: A:K.176, A:H.180

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Esposito, L. et al., The crystal structure of the superoxide dismutase from Helicobacter pylori reveals a structured C-terminal extension. Biochim.Biophys.Acta (2008)

Release Date

2008-06-10

Peptides

Superoxide dismutase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Superoxide dismutase