SMTL ID : 3ch4.1

The Crystal Structure of Human Phosphomavelonate Kinase At 1.8 A Resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.76 Å

Oligo State

monomer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 7 residues within 4Å: Chain A: K.21, S.22, G.23, K.24, D.25, F.26, R.143 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:S.22, A:G.23, A:K.24, A:D.25, A:D.25, A:D.25, A:F.26 Water bridges: A:K.21, A:R.143 Salt bridges: A:R.143 SO4.2: 3 residues within 4Å: Chain A: H.173, R.178, Q.182 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.182 Water bridges: A:E.171 Salt bridges: A:H.173, A:R.178

2 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.3: 6 residues within 4Å: Chain A: F.26, N.172, G.174, V.175, E.176, L.179 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:F.26, A:E.176 Hydrogen bonds: A:N.172, A:N.172 Water bridges: A:S.139, A:Q.142 MPD.4: 5 residues within 4Å: Chain A: W.168, I.170, Q.182, N.185, L.186 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:I.170, A:N.185 Hydrogen bonds: A:N.185

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chang, Q. et al., Crystal structure of human phosphomavelonate kinase at 1.8 A resolution. Proteins (2008)

Release Date

2008-07-29

Peptides

Phosphomevalonate kinase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Phosphomevalonate kinase