SMTL ID : 3ckr.3 (2 other biounits)

Crystal structure of BACE-1 in complex with inhibitor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

monomer

Ligands

1 x 009: (4S)-1,4-dibenzyl-N-[(1S,2R)-1-benzyl-3-{[3-(dimethylamino)benzyl]amino}-2-hydroxypropyl]-2-oxoimidazolidine-4-carboxamide(Non-covalent)

009.1: 18 residues within 4Å: Chain A: G.30, Q.31, G.32, L.49, D.51, G.53, P.89, Y.90, T.91, Q.92, F.127, I.129, I.145, Y.217, D.247, G.249, T.250, T.251 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:L.49, A:Y.90, A:Y.90, A:Q.92, A:F.127, A:I.129 Hydrogen bonds: A:D.51, A:G.53, A:T.91, A:Q.92, A:G.249, A:T.250, A:T.251, A:T.251

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Park, H. et al., Synthesis, SAR, and X-ray structure of human BACE-1 inhibitors with cyclic urea derivatives. Bioorg.Med.Chem.Lett. (2008)

Release Date

2008-06-03

Peptides

Beta-secretase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

Beta-secretase 1

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