- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.40 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x SPD: SPERMIDINE(Non-covalent)
SPD.1: 9 residues within 4Å:- Chain A: H.67, L.173, W.174, L.294, L.375, Y.450, G.487, C.488
- Ligands: FAD.2
6 PLIP interactions:6 interactions with chain A- Hydrophobic interactions: A:L.294, A:L.375, A:Y.450
- Hydrogen bonds: A:H.67, A:L.173, A:W.174
SPD.3: 10 residues within 4Å:- Chain B: W.65, H.67, L.173, W.174, L.294, F.359, L.375, Y.450, C.488
- Ligands: FAD.4
5 PLIP interactions:5 interactions with chain B- Hydrophobic interactions: B:W.65, B:W.174, B:L.375
- Hydrogen bonds: B:H.67, B:H.67
- 2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
FAD.2: 40 residues within 4Å:- Chain A: I.14, G.15, A.16, G.17, I.18, A.19, L.38, E.39, A.40, R.41, G.46, R.47, L.48, I.61, G.62, A.63, S.64, W.65, H.67, C.221, E.222, V.223, T.252, V.253, P.254, V.257, G.270, I.272, L.294, W.440, Y.445, A.449, Y.450, G.478, E.479, G.487, C.488, A.489, A.492
- Ligands: SPD.1
21 PLIP interactions:21 interactions with chain A- Hydrophobic interactions: A:L.294, A:W.440, A:Y.450
- Hydrogen bonds: A:I.18, A:A.19, A:A.40, A:R.41, A:R.47, A:A.63, A:S.64, A:W.65, A:W.65, A:V.223, A:V.223, A:E.479, A:G.487, A:A.489
- Water bridges: A:G.17
- Salt bridges: A:R.47, A:R.47
- pi-Stacking: A:Y.445
FAD.4: 40 residues within 4Å:- Chain B: I.14, G.15, A.16, G.17, I.18, A.19, L.38, E.39, A.40, R.41, G.46, R.47, L.48, I.61, G.62, A.63, S.64, W.65, H.67, C.221, E.222, V.223, T.252, V.253, P.254, V.257, G.270, L.294, K.296, W.440, Y.445, A.449, Y.450, G.478, E.479, G.487, C.488, A.489, A.492
- Ligands: SPD.3
25 PLIP interactions:25 interactions with chain B- Hydrophobic interactions: B:L.294, B:W.440, B:A.449, B:Y.450
- Hydrogen bonds: B:I.18, B:A.19, B:A.40, B:R.41, B:G.45, B:R.47, B:A.63, B:S.64, B:W.65, B:W.65, B:V.223, B:V.223, B:E.479, B:G.487, B:A.489
- Water bridges: B:G.20, B:G.46, B:Y.201
- Salt bridges: B:R.47, B:R.47
- pi-Stacking: B:Y.445
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Huang, Q. et al., Crystal structure of fms1 in complex with spermidine. TO BE PUBLISHED
- Release Date
- 2008-04-22
- Peptides
- Polyamine oxidase FMS1: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.40 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x SPD: SPERMIDINE(Non-covalent)
- 2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Huang, Q. et al., Crystal structure of fms1 in complex with spermidine. TO BE PUBLISHED
- Release Date
- 2008-04-22
- Peptides
- Polyamine oxidase FMS1: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
A