SMTL ID : 3cq0.2 (2 other biounits)

Crystal Structure of TAL2_YEAST

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

9 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 6 residues within 4Å: Chain A: V.121, K.122, L.125, E.157, K.161, H.162 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.157, A:E.157, A:K.161 EDO.2: 3 residues within 4Å: Chain A: N.184, V.185, A.231 1 PLIP interactions: 1 interactions with chain A Water bridges: A:T.186 EDO.3: 4 residues within 4Å: Chain A: K.20, E.40, P.41, Q.42 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.20 Water bridges: A:H.25 EDO.4: 4 residues within 4Å: Chain A: Y.70, H.74, N.84, H.126 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.70, A:N.84 Water bridges: A:N.84 EDO.5: 2 residues within 4Å: Chain A: H.79, Y.326 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:H.79, A:Y.326 EDO.6: 6 residues within 4Å: Chain A: L.98, K.99, V.100, V.101, P.102, R.140 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:L.98, A:R.140, A:R.140 EDO.8: 3 residues within 4Å: Chain A: R.227, K.281, E.282 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.282 Water bridges: A:R.227 EDO.9: 4 residues within 4Å: Chain A: V.288, F.290, H.296, V.300 No protein-ligand interaction detected (PLIP) EDO.10: 2 residues within 4Å: Chain A: K.287, S.289 No protein-ligand interaction detected (PLIP)

1 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)

PG4.7: 8 residues within 4Å: Chain A: F.115, T.148, W.149, E.150, R.298, L.301, T.308, L.311 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:W.149, A:E.150, A:R.298 Water bridges: A:R.298, A:N.302

7 x GOL: GLYCEROL(Non-functional Binders)

GOL.11: 4 residues within 4Å: Chain A: K.20, G.23, T.24, H.25 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.23, A:T.24 Water bridges: A:V.26 GOL.12: 7 residues within 4Å: Chain A: M.86, D.87, L.90, D.110, R.112, K.123, I.322 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.112, A:K.123, A:K.123 Water bridges: A:D.110, A:D.110 GOL.13: 5 residues within 4Å: Chain A: H.79, E.83, D.110, R.112, L.113 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:H.79 Water bridges: A:D.110 GOL.14: 4 residues within 4Å: Chain A: H.228, G.229, Y.230, K.287 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.229, A:K.287 GOL.15: 7 residues within 4Å: Chain A: D.29, N.47, K.144, F.191, A.237, S.238, T.255 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:T.45, A:T.45, A:N.47, A:K.144, A:S.238 Water bridges: A:D.29, A:T.255 GOL.16: 2 residues within 4Å: Chain A: E.282, E.283 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.283 GOL.17: 3 residues within 4Å: Chain A: S.319, A.320, E.323 2 PLIP interactions: 2 interactions with chain A Water bridges: A:R.316, A:A.320

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Huang, H. et al., The crystal structure and identification of NQM1/YGR043C, a transaldolase from Saccharomyces cerevisiae. Proteins (2008)

Release Date

2009-04-07

Peptides

Putative transaldolase YGR043C: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Putative transaldolase YGR043C

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