SMTL ID : 3csk.1

Structure of DPP III from Saccharomyces cerevisiae

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.460, E.461, H.465, E.517 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.460, A:H.465, A:E.517, A:E.517, H2O.10

2 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 4 residues within 4Å: Chain A: I.363, S.364, L.366, W.368 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:S.364, A:L.366, A:W.368, H2O.11, H2O.13 MG.3: 1 residues within 4Å: Chain A: D.490 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Baral, P.K. et al., The first structure of dipeptidyl-peptidase III provides insight into the catalytic mechanism and mode of substrate binding. J.Biol.Chem. (2008)

Release Date

2008-06-10

Peptides

Probable dipeptidyl-peptidase 3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Probable dipeptidyl-peptidase 3