SMTL ID : 3d5x.1

Crystal structure of an activated (Thr->Asp) Polo-like kinase 1 (Plk1) catalytic domain in complex with wortmannin.

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

monomer

Ligands

1 x KWT: (1S,6BR,9AS,11R,11BR)-9A,11B-DIMETHYL-1-[(METHYLOXY)METHYL]-3,6,9-TRIOXO-1,6,6B,7,8,9,9A,10,11,11B-DECAHYDRO-3H-FURO[4, 3,2-DE]INDENO[4,5-H][2]BENZOPYRAN-11-YL ACETATE(Covalent)

KWT.1: 14 residues within 4Å: Chain A: L.34, K.36, G.37, A.40, C.42, A.55, K.57, V.89, L.105, E.106, I.107, C.108, N.156, F.158 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:A.55, A:K.57, A:V.89, A:F.158 Hydrogen bonds: A:C.108, A:R.111 Salt bridges: A:K.57

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Elling, R.A. et al., Structures of the wild-type and activated catalytic domains of Brachydanio rerio Polo-like kinase 1 (Plk1): changes in the active-site conformation and interactions with ligands. Acta Crystallogr.,Sect.D (2008)

Release Date

2008-08-26

Peptides

Polo-like kinase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Polo-like kinase 1

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