SMTL ID : 3dgn.1

A non-biological ATP binding protein crystallized in the presence of 100 mM ADP

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.25, C.28, C.48, C.51 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.25, A:C.28, A:C.48, A:C.51

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.2: 11 residues within 4Å: Chain A: D.34, K.36, R.43, Y.45, N.46, M.47, C.48, F.52, H.64, G.65, H.66 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:R.43, A:Y.45, A:M.47, A:M.47, A:G.65, A:H.66 Salt bridges: A:K.36, A:K.36, A:R.43 pi-Stacking: A:Y.45, A:F.52, A:F.52

2 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.3: 5 residues within 4Å: Chain A: L.16, K.17, Y.20, W.35, L.42 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.17, A:K.17 PEG.4: 4 residues within 4Å: Chain A: K.11, N.14, W.15, R.18 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.14

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Simmons, C.R. et al., A synthetic protein selected for ligand binding affinity mediates ATP hydrolysis. Acs Chem.Biol. (2009)

Release Date

2009-06-30

Peptides

ATP Binding Protein-DX: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

ATP Binding Protein-DX

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