SMTL ID : 3dl9.1 (1 other biounit)

Crystal structure of CYP2R1 in complex with 1-alpha-hydroxy-vitamin D2

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.72 Å

Oligo State

monomer

Ligands

1 x GLC- GLC- GLC- GLC- GLC- GLC- GLC: Cycloheptakis-(1-4)-(alpha-D-glucopyranose)(Non-covalent)

GLC-GLC-GLC-GLC-GLC-GLC-GLC.1: 4 residues within 4Å: Chain A: L.212, P.213, F.214, G.215 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.215 Water bridges: A:G.215

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.2: 25 residues within 4Å: Chain A: R.83, L.98, L.99, W.107, R.111, F.118, T.165, L.281, A.284, G.285, T.288, T.289, V.292, V.349, G.352, I.353, H.355, L.378, P.414, F.415, S.416, R.420, C.422, G.424, A.428 19 PLIP interactions: 19 interactions with chain A, Hydrophobic interactions: A:F.118, A:T.165, A:A.284, A:V.292, A:V.349, A:V.349, A:I.353, A:L.378, A:F.415 Hydrogen bonds: A:L.99, A:S.416, A:S.416 Water bridges: A:I.353 Salt bridges: A:R.83, A:R.83, A:R.111, A:H.355, A:R.420 Metal complexes: A:C.422

1 x V2H: (1S,3R,5Z,7E,22E)-9,10-secoergosta-5,7,10,22-tetraene-1,3-diol(Non-covalent)

V2H.3: 19 residues within 4Å: Chain A: M.92, T.93, N.100, F.188, V.192, A.195, A.224, V.227, Y.228, L.231, I.275, F.276, G.279, E.280, T.288, V.349, I.353, M.461, T.462 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:M.92, A:T.93, A:F.188, A:F.188, A:V.192, A:Y.228, A:E.280, A:T.288, A:V.349, A:I.353 Hydrogen bonds: A:A.224, A:Y.228, A:G.279

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Strushkevich, N.V. et al., Crystal structure of CYP2R1 in complex with 1-alpha-hydroxy-vitamin D2. To be Published

Release Date

2008-08-05

Peptides

Cytochrome P450 2R1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cytochrome P450 2R1

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