SMTL ID : 3dlh.2 (1 other biounit)

Crystal structure of the guide-strand-containing Argonaute protein silencing complex

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

monomer

Ligands

2 x ACY: ACETIC ACID(Non-functional Binders)

ACY.1: 2 residues within 4Å: Chain A: W.156 Ligands: ACY.2 No protein-ligand interaction detected (PLIP) ACY.2: 6 residues within 4Å: Chain A: R.13, L.596, E.597, T.600, K.618 Ligands: ACY.1 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:E.597 Hydrogen bonds: A:E.597 Salt bridges: A:R.13, A:K.618

1 x MG: MAGNESIUM ION(Non-covalent)

MG.3: 3 residues within 4Å: Chain A: V.685 Chain B: T.1, A.3 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:V.685

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, Y. et al., Structure of the guide-strand-containing argonaute silencing complex. Nature (2008)

Release Date

2008-09-02

Peptides

Argonaute: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Argonaute

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