SMTL ID : 3dnm.5 (5 other biounits)

Crystal Structure Hormone-Sensitive Lipase from a Metagenome Library

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

homo-tetramer

Ligands

4 x BME: BETA-MERCAPTOETHANOL(Non-functional Binders)

BME.1: 6 residues within 4Å: Chain A: G.104, S.171, L.220, A.221, M.229, H.295 No protein-ligand interaction detected (PLIP) BME.5: 6 residues within 4Å: Chain B: G.104, S.171, L.220, A.221, M.229, H.295 No protein-ligand interaction detected (PLIP) BME.9: 6 residues within 4Å: Chain C: G.103, G.104, S.171, L.220, A.221, H.295 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:L.220 BME.12: 6 residues within 4Å: Chain D: G.103, G.104, S.171, L.220, A.221, H.295 1 PLIP interactions: 1 interactions with chain D Hydrogen bonds: D:L.220

10 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 4 residues within 4Å: Chain A: A.69, E.70, Q.119, K.122 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.70, A:Q.119 Salt bridges: A:K.122 SO4.3: 3 residues within 4Å: Chain A: R.208, Y.248, R.277 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.208, A:R.277 SO4.4: 3 residues within 4Å: Chain A: L.189, P.190, M.191 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:M.191 SO4.6: 4 residues within 4Å: Chain B: A.69, E.70, Q.119, K.122 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:E.70, B:Q.119 Salt bridges: B:K.122 SO4.7: 3 residues within 4Å: Chain B: R.208, Y.248, R.277 2 PLIP interactions: 2 interactions with chain B Salt bridges: B:R.208, B:R.277 SO4.8: 3 residues within 4Å: Chain B: L.189, P.190, M.191 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:M.191 SO4.10: 5 residues within 4Å: Chain C: R.68, A.69, E.70, Q.119, K.122 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:E.70, C:Q.119 Salt bridges: C:K.122 SO4.11: 3 residues within 4Å: Chain C: R.208, Y.248, R.277 2 PLIP interactions: 2 interactions with chain C Salt bridges: C:R.208, C:R.277 SO4.13: 5 residues within 4Å: Chain D: R.68, A.69, E.70, Q.119, K.122 3 PLIP interactions: 3 interactions with chain D Hydrogen bonds: D:E.70, D:Q.119 Salt bridges: D:K.122 SO4.14: 3 residues within 4Å: Chain D: R.208, Y.248, R.277 2 PLIP interactions: 2 interactions with chain D Salt bridges: D:R.208, D:R.277

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nam, K.H. et al., Structural and functional analysis of a novel hormone-sensitive lipase from a metagenome library. Proteins (2008)

Release Date

2009-01-13

Peptides

Esterase/lipase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
D

C
A

D
A

Esterase/lipase

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