SMTL ID : 3dok.1

Crystal structure of K103N mutant HIV-1 reverse transcriptase in complex with GW678248.

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

hetero-1-1-mer

Ligands

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 5 residues within 4Å: Chain A: E.89, Q.91, L.92, G.93 Chain B: N.137 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:L.92, A:G.93, B:N.137

1 x GWJ: 2-{4-chloro-2-[(3-chloro-5-cyanophenyl)carbonyl]phenoxy}-N-(2-methyl-4-sulfamoylphenyl)acetamide(Non-covalent)

GWJ.2: 19 residues within 4Å: Chain A: L.100, K.101, K.102, N.103, K.104, S.105, V.106, V.108, V.179, Y.188, V.189, G.190, P.225, F.227, W.229, L.234, H.235, P.236, Y.318 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:V.106, A:V.106, A:V.106, A:F.227, A:L.234, A:L.234, A:P.236 Hydrogen bonds: A:N.103, A:V.106 pi-Stacking: A:Y.181, A:Y.188, A:W.229, A:W.229 Halogen bonds: A:V.179, A:Y.188

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ren, J. et al., Structural basis for the improved drug resistance profile of new generation benzophenone non-nucleoside HIV-1 reverse transcriptase inhibitors. J.Med.Chem. (2008)

Release Date

2008-08-12

Peptides

Reverse transcriptase/ribonuclease H: A
p51 RT: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Reverse transcriptase/ribonuclease H

p51 RT

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