SMTL ID : 3e2v.1 (1 other biounit)

Crystal structure of an uncharacterized amidohydrolase from Saccharomyces cerevisiae

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 7 residues within 4Å: Chain A: C.189, S.236, S.237, S.239, G.240, F.241, Y.242 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:S.236, A:S.237, A:G.240, A:F.241 Water bridges: A:C.189, A:S.195, A:F.241 GOL.2: 9 residues within 4Å: Chain A: E.308, P.331, S.335, M.352, V.353, K.354, G.355, R.356, N.361 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:E.308, A:V.353, A:G.355, A:N.361 Water bridges: A:S.335, A:S.335, A:V.353, A:N.361, A:Q.364

1 x MG: MAGNESIUM ION(Non-covalent)

MG.3: 3 residues within 4Å: Chain A: E.161, H.253, D.303 6 PLIP interactions: 2 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:H.253, A:D.303, H2O.2, H2O.5, H2O.8, H2O.8

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bonanno, J.B. et al., Crystal structure of an uncharacterized amidohydrolase from Saccharomyces cerevisiae. To be Published

Release Date

2008-08-26

Peptides

3'-5'-exonuclease: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

3'-5'-exonuclease

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