SMTL ID : 3e7x.1

Crystal structure of DLTA: implications for the reaction mechanism of non-ribosomal peptide synthetase (NRPS) adenylation domains

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

monomer

Ligands

1 x AMP: ADENOSINE MONOPHOSPHATE(Non-covalent)

AMP.1: 14 residues within 4Å: Chain A: G.269, E.270, V.271, N.291, T.292, Y.293, G.294, P.295, T.296, V.320, D.382, R.396, K.402, R.407 15 PLIP interactions: 15 interactions with chain A Hydrogen bonds: A:G.269, A:T.292, A:G.294, A:T.296, A:T.296, A:T.296, A:D.382 Water bridges: A:D.196, A:L.272, A:L.272, A:T.296, A:R.407 Salt bridges: A:K.402, A:R.407 pi-Stacking: A:Y.293

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yonus, H. et al., Crystal structure of DltA. Implications for the reaction mechanism of non-ribosomal peptide synthetase adenylation domains. J.Biol.Chem. (2008)

Release Date

2008-09-09

Peptides

D-alanine--poly(phosphoribitol) ligase subunit 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

D-alanine--poly(phosphoribitol) ligase subunit 1

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