SMTL ID : 3ei7.1

Crystal structure of apo-LL-diaminopimelate aminotransferase from Arabidopsis thaliana (no PLP)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.99 Å

Oligo State

homo-dimer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: A.35, G.36, Y.37, P.40, R.44 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.36, A:Y.37, A:Y.37 Salt bridges: A:R.44 SO4.2: 6 residues within 4Å: Chain A: R.302 Chain B: A.35, G.36, Y.37, P.40, R.44 4 PLIP interactions: 3 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:G.36, B:Y.37, A:R.302 Salt bridges: B:R.44

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Watanabe, N. et al., Mechanism of substrate recognition and PLP-induced conformational changes in LL-diaminopimelate aminotransferase from Arabidopsis thaliana. J.Mol.Biol. (2008)

Release Date

2008-10-14

Peptides

LL-diaminopimelate aminotransferase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

LL-diaminopimelate aminotransferase

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