- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-dimer
- Ligands
- 8 x TRP: TRYPTOPHAN(Non-covalent)
- 14 x BOG: octyl beta-D-glucopyranoside(Non-covalent)
BOG.5: 7 residues within 4Å:- Chain A: I.120, K.121, V.124, L.126, F.147, F.167
- Ligands: BOG.6
9 PLIP interactions:9 interactions with chain A- Hydrophobic interactions: A:I.120, A:K.121, A:V.124, A:L.126, A:F.167
- Hydrogen bonds: A:K.121, A:L.126
- Water bridges: A:S.165
- Salt bridges: A:K.121
BOG.6: 5 residues within 4Å:- Chain A: L.166, F.167, I.170, I.174
- Ligands: BOG.5
4 PLIP interactions:4 interactions with chain A- Hydrophobic interactions: A:F.167, A:F.167, A:I.170, A:I.174
BOG.7: 8 residues within 4Å:- Chain A: K.163, P.164, S.165, L.166, Y.169, H.391, F.395
- Ligands: BOG.8
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:P.164
- Salt bridges: A:K.163
BOG.8: 9 residues within 4Å:- Chain A: K.163, H.391, F.395
- Chain B: M.476, E.477, W.484, F.488
- Ligands: BOG.7, BOG.9
8 PLIP interactions:6 interactions with chain A, 2 interactions with chain B- Hydrophobic interactions: A:F.395, A:F.395, A:F.395, B:W.484, B:F.488
- Hydrogen bonds: A:K.163, A:K.163
- Salt bridges: A:K.163
BOG.9: 14 residues within 4Å:- Chain A: I.161, L.392, F.395, L.396
- Chain B: M.476, E.477, E.478, T.479, W.481, V.483, W.484, I.485, R.487
- Ligands: BOG.8
12 PLIP interactions:5 interactions with chain A, 7 interactions with chain B- Hydrophobic interactions: A:I.161, A:I.161, A:L.392, A:L.396, B:W.481, B:I.485
- Water bridges: A:E.159, B:W.481
- Hydrogen bonds: B:E.477, B:T.479, B:R.487, B:R.487
BOG.10: 8 residues within 4Å:- Chain A: F.208, R.212, L.215, L.216, E.217, A.335, G.336, L.340
10 PLIP interactions:10 interactions with chain A- Hydrophobic interactions: A:F.208, A:R.212, A:L.340
- Hydrogen bonds: A:R.212, A:R.212, A:E.217, A:E.217
- Water bridges: A:E.217, A:A.335
- Salt bridges: A:R.212
BOG.12: 10 residues within 4Å:- Chain A: R.30, D.404, F.405, T.409, I.410, V.413, L.463, L.464, W.467
- Ligands: TRP.2
16 PLIP interactions:13 interactions with chain A, 3 Ligand-Ligand interactions- Hydrophobic interactions: A:V.413, A:V.413, A:L.463, A:L.463, A:L.464, A:W.467, A:W.467, A:W.467, W.2
- Hydrogen bonds: A:R.30, W.2, W.2
- Water bridges: A:Q.34, A:Q.34, A:D.404
- Salt bridges: A:R.30
BOG.19: 7 residues within 4Å:- Chain B: I.120, K.121, V.124, L.126, F.147, F.167
- Ligands: BOG.20
9 PLIP interactions:9 interactions with chain B- Hydrophobic interactions: B:I.120, B:K.121, B:V.124, B:L.126, B:F.167
- Hydrogen bonds: B:K.121, B:L.126
- Water bridges: B:S.165
- Salt bridges: B:K.121
BOG.20: 5 residues within 4Å:- Chain B: L.166, F.167, I.170, I.174
- Ligands: BOG.19
4 PLIP interactions:4 interactions with chain B- Hydrophobic interactions: B:F.167, B:F.167, B:I.170, B:I.174
BOG.21: 8 residues within 4Å:- Chain B: K.163, P.164, S.165, L.166, Y.169, H.391, F.395
- Ligands: BOG.22
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:P.164
- Salt bridges: B:K.163
BOG.22: 9 residues within 4Å:- Chain A: M.476, E.477, W.484, F.488
- Chain B: K.163, H.391, F.395
- Ligands: BOG.21, BOG.23
8 PLIP interactions:6 interactions with chain B, 2 interactions with chain A- Hydrophobic interactions: B:F.395, B:F.395, B:F.395, A:W.484, A:F.488
- Hydrogen bonds: B:K.163, B:K.163
- Salt bridges: B:K.163
BOG.23: 14 residues within 4Å:- Chain A: M.476, E.477, E.478, T.479, W.481, V.483, W.484, I.485, R.487
- Chain B: I.161, L.392, F.395, L.396
- Ligands: BOG.22
13 PLIP interactions:8 interactions with chain A, 5 interactions with chain B- Hydrophobic interactions: A:W.481, A:I.485, B:I.161, B:I.161, B:L.392, B:L.396
- Hydrogen bonds: A:E.477, A:T.479, A:T.479, A:R.487, A:R.487
- Water bridges: A:W.481, B:E.159
BOG.24: 8 residues within 4Å:- Chain B: F.208, R.212, L.215, L.216, E.217, A.335, G.336, L.340
9 PLIP interactions:9 interactions with chain B- Hydrophobic interactions: B:F.208, B:R.212, B:L.340
- Hydrogen bonds: B:R.212, B:R.212, B:E.217
- Water bridges: B:E.217, B:A.335
- Salt bridges: B:R.212
BOG.26: 10 residues within 4Å:- Chain B: R.30, D.404, F.405, T.409, I.410, V.413, L.463, L.464, W.467
- Ligands: TRP.16
18 PLIP interactions:15 interactions with chain B, 3 Ligand-Ligand interactions- Hydrophobic interactions: B:V.413, B:V.413, B:L.463, B:L.463, B:L.464, B:W.467, B:W.467, B:W.467, W.16
- Hydrogen bonds: B:R.30, B:D.404, B:T.409, W.16, W.16
- Water bridges: B:Q.34, B:Q.34, B:D.404
- Salt bridges: B:R.30
- 2 x C14: TETRADECANE(Non-covalent)
C14.11: 9 residues within 4Å:- Chain A: L.25, V.104, Y.108, W.114, F.253, F.320, D.404
- Ligands: TRP.1, TRP.2
8 PLIP interactions:6 interactions with chain A, 2 Ligand-Ligand interactions- Hydrophobic interactions: A:L.25, A:V.104, A:Y.108, A:W.114, A:F.253, A:F.320, W.1, W.2
C14.25: 9 residues within 4Å:- Chain B: L.25, V.104, Y.108, W.114, F.253, F.320, D.404
- Ligands: TRP.15, TRP.16
7 PLIP interactions:6 interactions with chain B, 1 Ligand-Ligand interactions- Hydrophobic interactions: B:L.25, B:V.104, B:Y.108, B:W.114, B:F.253, B:F.320, W.16
- 4 x NA: SODIUM ION(Non-functional Binders)
NA.13: 5 residues within 4Å:- Chain A: G.20, V.23, A.351, T.354, S.355
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:T.354, A:T.354
NA.14: 7 residues within 4Å:- Chain A: A.22, V.23, G.24, N.27, T.254, N.286
- Ligands: TRP.1
6 PLIP interactions:3 Ligand-Ligand interactions, 3 interactions with chain A- Hydrogen bonds: W.1, W.1, W.1, A:G.24, A:N.27, A:N.286
NA.27: 5 residues within 4Å:- Chain B: G.20, V.23, A.351, T.354, S.355
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:V.23
NA.28: 7 residues within 4Å:- Chain B: A.22, V.23, G.24, N.27, T.254, N.286
- Ligands: TRP.15
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:G.24, B:N.27, B:N.286, B:N.286
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Singh, S.K. et al., A competitive inhibitor traps LeuT in an open-to-out conformation. Science (2008)
- Release Date
- 2008-12-23
- Peptides
- Transporter: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A - Membrane
-
We predict this structure to be a membrane protein.
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-dimer
- Ligands
- 8 x TRP: TRYPTOPHAN(Non-covalent)
- 14 x BOG: octyl beta-D-glucopyranoside(Non-covalent)
- 2 x C14: TETRADECANE(Non-covalent)
- 4 x NA: SODIUM ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Singh, S.K. et al., A competitive inhibitor traps LeuT in an open-to-out conformation. Science (2008)
- Release Date
- 2008-12-23
- Peptides
- Transporter: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A - Membrane
-
We predict this structure to be a membrane protein.