SMTL ID : 3fe2.1 (1 other biounit)

Human DEAD-BOX RNA helicase DDX5 (P68), conserved domain I in complex with ADP

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 6 residues within 4Å: Chain A: G.138, T.159, P.160, G.161, R.162, F.193 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:G.138, A:T.159, A:T.159, A:G.161, A:R.162

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.2: 14 residues within 4Å: Chain A: F.31, F.49, E.51, P.52, T.53, Q.56, Q.74, T.75, G.76, S.77, G.78, K.79, T.80, L.81 15 PLIP interactions: 15 interactions with chain A Hydrogen bonds: A:E.51, A:T.53, A:Q.56, A:Q.74, A:G.76, A:S.77, A:G.78, A:K.79, A:T.80, A:T.80, A:T.80 Water bridges: A:L.81 Salt bridges: A:K.79 pi-Stacking: A:F.49, A:F.49

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schutz, P. et al., Comparative Structural Analysis of Human DEAD-Box RNA Helicases. Plos One (2010)

Release Date

2008-12-16

Peptides

Probable ATP-dependent RNA helicase DDX5: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Probable ATP-dependent RNA helicase DDX5

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