SMTL ID : 3fhd.1

Crystal structure of the Shutoff and Exonuclease Protein from Kaposis Sarcoma Associated Herpesvirus

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

monomer

Ligands

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 7 residues within 4Å: Chain A: R.161, S.166, S.167, S.168, V.240, S.241, Q.398 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:S.167, A:S.167, A:S.168, A:S.241, A:Q.398 Salt bridges: A:R.161 SO4.2: 4 residues within 4Å: Chain A: C.269, R.270, F.271, K.272 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:F.271, A:K.272 Salt bridges: A:R.270, A:K.272 SO4.3: 2 residues within 4Å: Chain A: R.341, R.392 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.341, A:R.392

1 x MG: MAGNESIUM ION(Non-covalent)

MG.4: 5 residues within 4Å: Chain A: E.206, D.243, E.266, I.267, K.268 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.243, A:E.266, A:I.267, H2O.8

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dahlroth, S.L. et al., Crystal structure of the shutoff and exonuclease protein from the oncogenic Kaposi's sarcoma-associated herpesvirus. Febs J. (2009)

Release Date

2009-11-24

Peptides

ORF 37: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

ORF 37