SMTL ID : 3fm5.2 (2 other biounits)

X-ray crystal structure of transcriptional regulator (MarR family) from Rhodococcus sp. RHA1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 5 residues within 4Å: Chain A: F.123, E.124, G.125, I.126, D.128 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.125 Water bridges: A:E.124, A:G.125 EDO.4: 5 residues within 4Å: Chain B: L.25, N.29, R.38, V.39, R.40 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:N.29, B:R.38, B:R.40 Water bridges: B:R.40, B:R.40

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 5 residues within 4Å: Chain A: S.43, M.64, L.66 Chain B: S.18, R.19 5 PLIP interactions: 2 interactions with chain B, 3 interactions with chain A Hydrogen bonds: B:S.18, A:S.43, A:S.43 Water bridges: B:G.22, A:R.40

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 3 residues within 4Å: Chain B: Q.57, V.72, R.86 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nocek, B. et al., X-ray crystal structure of transcriptional regulator (MarR family) from Rhodococcus sp. RHA1. To be Published

Release Date

2009-02-03

Peptides

Transcriptional regulator: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
D

Transcriptional regulator

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