SMTL ID : 3fqi.1

Crystal Structure of the Mouse Dom3Z

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.01 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 4 residues within 4Å: Chain A: D.256, E.273, L.274, K.275 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.256, A:E.273, A:L.274, H2O.8, H2O.10

1 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Non-functional Binders)

EPE.2: 10 residues within 4Å: Chain A: R.115, V.119, Q.120, E.121, W.151, R.152, G.153, S.252, G.253, E.254 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:R.115, A:V.119, A:E.121, A:E.121, A:G.153, A:E.254 Water bridges: A:R.78, A:R.122, A:G.153 Salt bridges: A:E.121, A:R.152, A:E.254

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xiang, S. et al., Structure and function of the 5'-->3' exoribonuclease Rat1 and its activating partner Rai1. Nature (2009)

Release Date

2009-02-03

Peptides

Protein Dom3Z: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Protein Dom3Z

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