SMTL ID : 3g1y.1

Crystal structure of the mutant D70N of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with sulfate

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

homo-dimer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: K.42, N.70, K.72 Chain B: D.75, I.76 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:N.70 Water bridges: A:K.42, A:N.70, A:K.72, A:K.72, A:K.72 Salt bridges: A:K.42, A:K.72 SO4.2: 5 residues within 4Å: Chain A: D.75, I.76 Chain B: K.42, N.70, K.72 8 PLIP interactions: 8 interactions with chain B Hydrogen bonds: B:N.70 Water bridges: B:K.42, B:N.70, B:K.72, B:K.72, B:K.72 Salt bridges: B:K.42, B:K.72

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chan, K.K. et al., Mechanism of the orotidine 5'-monophosphate decarboxylase-catalyzed reaction: evidence for substrate destabilization. Biochemistry (2009)

Release Date

2009-06-23

Peptides

Orotidine 5'-phosphate decarboxylase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Orotidine 5'-phosphate decarboxylase

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