SMTL ID : 3gad.1 (1 other biounit)

Structure of apomif

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-trimer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 2 residues within 4Å: Chain A: K.91, R.93 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:K.91, A:R.93 SO4.2: 3 residues within 4Å: Chain B: K.15, N.18, H.87 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:N.18 Water bridges: B:H.87 Salt bridges: B:K.15, B:H.87 SO4.3: 1 residues within 4Å: Chain B: R.93 3 PLIP interactions: 3 interactions with chain B Water bridges: B:R.93, B:R.93 Salt bridges: B:R.93 SO4.4: 2 residues within 4Å: Chain C: K.91, R.93 2 PLIP interactions: 2 interactions with chain C Salt bridges: C:K.91, C:R.93

2 x ACY: ACETIC ACID(Non-functional Binders)

ACY.5: 5 residues within 4Å: Chain B: R.93, Y.96 Chain C: A.36, Y.37, F.109 6 PLIP interactions: 4 interactions with chain C, 2 interactions with chain B Hydrophobic interactions: C:Y.37, C:F.109 Hydrogen bonds: C:A.36 Water bridges: C:Y.37, B:R.93 Salt bridges: B:R.93 ACY.6: 3 residues within 4Å: Chain C: G.67, N.69, N.72 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:N.69, C:N.72 Water bridges: C:G.67

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shao, D. et al., Structural and functional comparison of MIF ortholog from Plasmodium yoelii with MIF from its rodent host. Mol.Immunol. (2010)

Release Date

2009-12-29

Peptides

Macrophage migration inhibitory factor-like protein: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Macrophage migration inhibitory factor-like protein

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