SMTL ID : 3gbb.2 (1 other biounit)

X-ray structure of iGluR5 ligand-binding core (S1S2) in complex with MSVIII-19 at 2.10A resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x MS8: (2R,3aR,7aR)-2-[(2S)-2-amino-3-hydroxy-3-oxo-propyl]-3,3a,5,6,7,7a-hexahydrofuro[4,5-b]pyran-2-carboxylic acid(Non-covalent)

MS8.1: 13 residues within 4Å: Chain A: E.13, Y.61, P.88, L.89, T.90, R.95, G.140, S.141, T.142, S.173, E.190, S.193, Y.216 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:Y.61, A:Y.61 Hydrogen bonds: A:P.88, A:T.90, A:T.90, A:S.141, A:T.142, A:E.190 Water bridges: A:T.142, A:T.142, A:E.190, A:E.190 Salt bridges: A:R.95

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Frydenvang, K. et al., Full Domain Closure of the Ligand-binding Core of the Ionotropic Glutamate Receptor iGluR5 Induced by the High Affinity Agonist Dysiherbaine and the Functional Antagonist 8,9-Dideoxyneodysiherbaine. J.Biol.Chem. (2009)

Release Date

2009-03-17

Peptides

Glutamate receptor, ionotropic kainate 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Glutamate receptor, ionotropic kainate 1

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