SMTL ID : 3gh5.1

Crystal structure of beta-hexosaminidase from Paenibacillus sp. TS12 in complex with GlcNAc

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 1 residues within 4Å: Chain A: R.434 5 PLIP interactions: 5 interactions with chain A Water bridges: A:A.415, A:R.434, A:R.434, A:R.441 Salt bridges: A:R.434

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)

NAG.2: 13 residues within 4Å: Chain A: R.193, H.281, D.344, E.345, W.375, W.393, Y.418, D.420, M.421, L.431, W.433, W.464, E.466 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:D.344, A:W.375, A:W.393, A:W.464 Hydrogen bonds: A:R.193, A:R.193, A:D.344, A:D.344, A:D.344, A:E.345, A:Y.418, A:D.420

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sumida, T. et al., Molecular cloning and crystal structural analysis of a novel beta-N-acetylhexosaminidase from Paenibacillus sp. TS12 capable of degrading glycosphingolipids. J.Mol.Biol. (2009)

Release Date

2009-07-07

Peptides

beta-hexosaminidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

beta-hexosaminidase

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