SMTL ID : 3gwl.1

Crystal structure of ASFV pB119L, a viral sulfhydryl oxidase

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 24 residues within 4Å: Chain A: M.4, L.5, G.8, P.9, Y.11, W.12, H.16, F.41, L.45, R.49, C.50, H.53, F.76, F.78, H.79, N.80, V.82, N.83, R.85, L.86, K.88, I.91, Y.96, I.99 20 PLIP interactions: 20 interactions with chain A Hydrophobic interactions: A:Y.11, A:W.12, A:W.12, A:W.12, A:F.41, A:L.45, A:L.45, A:F.78 Hydrogen bonds: A:W.12, A:R.49, A:F.76, A:N.83, A:R.85 Water bridges: A:K.88, A:K.88 Salt bridges: A:H.79, A:K.88, A:K.88 pi-Stacking: A:H.79, A:H.79 FAD.2: 24 residues within 4Å: Chain B: M.4, G.8, P.9, Y.11, W.12, H.16, F.41, L.45, R.49, C.50, H.53, F.76, F.78, H.79, N.80, V.82, N.83, R.85, L.86, K.88, I.91, Y.96, I.99, Y.100 17 PLIP interactions: 17 interactions with chain B Hydrophobic interactions: B:Y.11, B:W.12, B:W.12, B:W.12, B:F.41, B:L.45, B:F.78 Hydrogen bonds: B:W.12, B:R.49, B:F.76, B:N.83, B:R.85, B:K.88 Salt bridges: B:H.79, B:K.88 pi-Stacking: B:H.79, B:H.79

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hakim, M. et al., Dimer interface migration in a viral sulfhydryl oxidase. J.Mol.Biol. (2009)

Release Date

2009-07-07

Peptides

FAD-linked sulfhydryl oxidase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

FAD-linked sulfhydryl oxidase