- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.65 Å
- Oligo State
- homo-tetramer
- Ligands
- 5 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 6 x PO4: PHOSPHATE ION(Non-functional Binders)
PO4.3: 5 residues within 4Å:- Chain A: G.13, T.14, G.267, T.268
- Ligands: EDO.1
10 PLIP interactions:10 interactions with chain A- Hydrogen bonds: A:T.14, A:T.14, A:T.268
- Water bridges: A:S.16, A:S.16, A:D.246, A:D.246, A:G.267, A:G.269, A:G.269
PO4.4: 7 residues within 4Å:- Chain A: S.59, A.62, G.63, I.66
- Chain B: S.59, A.62, G.63
2 PLIP interactions:1 interactions with chain B, 1 interactions with chain A- Hydrogen bonds: B:G.63, A:S.59
PO4.5: 7 residues within 4Å:- Chain A: A.310, G.311, I.314, L.382, V.385, A.413, L.419
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:A.310, A:A.310
- Water bridges: A:V.385, A:N.416
PO4.7: 4 residues within 4Å:- Chain B: T.14, G.267, T.268
- Ligands: EDO.6
9 PLIP interactions:9 interactions with chain B- Hydrogen bonds: B:T.14, B:T.14, B:T.14, B:D.246, B:T.268, B:T.268, B:T.268
- Water bridges: B:Q.247, B:Q.247
PO4.9: 5 residues within 4Å:- Chain C: G.13, T.14, D.246, G.267, T.268
4 PLIP interactions:4 interactions with chain C- Hydrogen bonds: C:T.14, C:D.246, C:T.268, C:T.268
PO4.11: 3 residues within 4Å:- Chain D: G.13, T.14, T.268
4 PLIP interactions:4 interactions with chain D- Hydrogen bonds: D:T.14, D:T.268, D:T.268, D:T.268
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Yeh, J.I. et al., Structural characterizations of glycerol kinase: unraveling phosphorylation-induced long-range activation. Biochemistry (2009)
- Release Date
- 2009-06-02
- Peptides
- Glycerol kinase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
XB
OC
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.65 Å
- Oligo State
- homo-tetramer
- Ligands
- 5 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 6 x PO4: PHOSPHATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Yeh, J.I. et al., Structural characterizations of glycerol kinase: unraveling phosphorylation-induced long-range activation. Biochemistry (2009)
- Release Date
- 2009-06-02
- Peptides
- Glycerol kinase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
XB
OC
CD
D