SMTL ID : 3h7j.1 (1 other biounit)

Crystal structure of BacB, an enzyme involved in Bacilysin synthesis, in monoclinic form

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.87 Å

Oligo State

monomer

Ligands

2 x CO: COBALT (II) ION(Non-covalent)

CO.1: 4 residues within 4Å: Chain A: H.50, H.52, Q.56, H.91 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.50, A:H.52, A:H.91, H2O.1, H2O.2 CO.2: 5 residues within 4Å: Chain A: H.162, H.164, Q.168, H.202 Ligands: PPY.3 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.162, A:H.164, A:H.202

1 x PPY: 3-PHENYLPYRUVIC ACID(Non-covalent)

PPY.3: 15 residues within 4Å: Chain A: L.131, M.148, I.152, M.159, H.162, H.164, Q.168, H.202, A.204, S.214, N.216, F.218, R.222, Y.223 Ligands: CO.2 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:I.152, A:A.204 Hydrogen bonds: A:Q.168 Salt bridges: A:H.162, A:H.164, A:R.222

2 x FE: FE (III) ION(Non-covalent)

FE.4: 2 residues within 4Å: Chain A: N.155, E.209 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:E.209, A:E.209, H2O.2, H2O.3, H2O.5 FE.5: 3 residues within 4Å: Chain A: D.33, E.167, E.197 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.33, A:E.167, A:E.197, H2O.2, H2O.2

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rajavel, M. et al., Role of Bacillus subtilis BacB in the synthesis of bacilysin. J.Biol.Chem. (2009)

Release Date

2009-09-22

Peptides

Bacilysin biosynthesis protein bacB: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bacilysin biosynthesis protein bacB

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